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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6009130 chr22:49414658 C/T ASCC2 chr22:30184597-30234293:- -0.59 -7.01 8.09E-12 Box Plot
THCA rs6009130 chr22:49414658 C/T ATXN10 chr22:46067678-46241187:+ -0.75 -8.43 4.23E-16 Box Plot
THCA rs6009130 chr22:49414658 C/T C22orf13 chr22:24936406-24951903:- -0.52 -5.9 6.78E-9 Box Plot
THCA rs6009130 chr22:49414658 C/T C22orf23 chr22:38339057-38349676:- -0.56 -6.43 3.17E-10 Box Plot
THCA rs6009130 chr22:49414658 C/T C22orf26 chr22:46445358-46450024:- -0.71 -6.28 7.77E-10 Box Plot
THCA rs6009130 chr22:49414658 C/T C22orf30 chr22:32072242-32146120:- -0.49 -7.11 4.35E-12 Box Plot
THCA rs6009130 chr22:49414658 C/T C22orf32 chr22:42475699-42480287:+ -0.53 -6.74 4.53E-11 Box Plot
THCA rs6009130 chr22:49414658 C/T C22orf39 chr22:19338891-19435755:- -0.67 -7.67 1.0E-13 Box Plot
THCA rs6009130 chr22:49414658 C/T C22orf40 chr22:46639911-46646193:- -0.59 -7.93 1.61E-14 Box Plot
THCA rs6009130 chr22:49414658 C/T C22orf46 chr22:42084943-42094140:+ -0.75 -6.74 4.51E-11 Box Plot
THCA rs6009130 chr22:49414658 C/T CABIN1 chr22:24407642-24574596:+ -0.56 -6.59 1.14E-10 Box Plot
THCA rs6009130 chr22:49414658 C/T CBX6 chr22:39257455-39268319:- -0.39 -6.23 1.02E-9 Box Plot
THCA rs6009130 chr22:49414658 C/T CBY1 chr22:39052641-39069859:+ -0.69 -8.69 5.92E-17 Box Plot
THCA rs6009130 chr22:49414658 C/T CCDC117 chr22:29168662-29185289:+ -0.62 -7.12 4.03E-12 Box Plot
THCA rs6009130 chr22:49414658 C/T CCDC134 chr22:42196683-42222303:+ -0.63 -5.91 6.69E-9 Box Plot